Recent Publications

Zhuang L, Tabatabaei SMH, Salehi-Rad R, Tran LM, Aberle DR, Prosper AE, Hsu W. Vision-language model-based semantic-guided imaging biomarker for lung nodule malignancy prediction. J Biomed Inform. 2025 Oct 27:104947. Paper | Code

Redekop E, Wang Z, Kulkarni R, Pleasure M, Chin A, Hassanzadeh HR, Hill BL, Emami M, Speier WF, Arnold CW. Zero-shot medical event prediction using a generative pretrained transformer on electronic health records. J Am Med Inform Assoc. 2025 Oct 8:ocaf160. Paper

Rahrooh A, Garlid AO, Petousis P, Funnell A, Bui AAT. MedPromptEval: A Comprehensive Framework for Systematic Evaluation of Clinical Question Answering Systems. Stud Health Technol Inform. 2025 Oct 2;332:262-266. Paper

Fu M, Sankararaman S, Pasaniuc B, Vossel K, Chang TS. Identifying common disease trajectories of Alzheimer’s disease with electronic health records. EBioMedicine. 2025 Aug;118:105831. Paper | Code

Pelletier AR, Ramirez J, Sankar BS, Adam I, Yan Y, Steinecke D, Wang W, Watson KE, Ping P. Evidence-based Knowledge Synthesis and Hypothesis Validation: Navigating Biomedical Knowledge Bases via Explainable AI and Agentic Systems. J Vis Exp. 2025 Jun 13;(220). Paper & Video | Code

Akre S, Cohen ZD, Welborn A, Zbozinek TD, Balliu B, Craske MG, Bui AAT. Comparing self reported and physiological sleep quality from consumer devices to depression and neurocognitive performance. NPJ Digit Med. 2025 Feb 9;8(1):92. Paper | Code